From faf1ab1c998bb4ab1d60d165a2ea205ab32724c7 Mon Sep 17 00:00:00 2001 From: Tom Gebhardt Date: Thu, 24 Apr 2025 15:32:28 +0200 Subject: [PATCH] Readme update --- README.md | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index 8ff7f5a..ee489f0 100644 --- a/README.md +++ b/README.md @@ -98,13 +98,12 @@ The MeDaX pipeline consists of the following components: ## ✍️ Citation -If you use the MeDaX pipeline in your research, please cite: 10.5281/zenodo.15229077 +If you use the MeDaX pipeline in your research, please cite: 10.5281/zenodo.15229077 and Mazein, I and Gebhardt, T et al. [MeDaX, a knowledge graph on FHIR.](https://doi.org/10.3233/shti240423) ## 🙏 Acknowledgements - We are leveraging [BioCypher](https://biocypher.org) [![DOI](https://zenodo.org/badge/DOI/10.1038/s41587-023-01848-y.svg)](https://doi.org/10.1038/s41587-023-01848-y) to create the Neo4j admin input. - - Remark: We slight adjustments to BioCypher's code to support batching. + - Remark: We introduced slight adjustments to BioCypher's code to support batching. - We used BioCypher's git template as a starting point for our development: - Lobentanzer, S., BioCypher Consortium, & Saez-Rodriguez, J. Democratizing knowledge representation with BioCypher [Computer software]. https://github.com/biocypher/biocypher - - +- We used synthetic data generated with [Synthea](https://doi.org/10.1093/jamia/ocx079) during the development process. This data is provided in the testData folder.